Logo

Neuromorphometrics, Inc.

Segmentation Protocols

Version 1.1 16-Jan-07

  1. Preprocessing
    1. Install Original Scan
    2. Bias Correction
    3. Positional Normalization
    4. Cropping
  2. Segmentation
    1. Cerebral Exterior
    2. Lateral Ventricles
    3. Inferior Lateral Ventricles
    4. Third Ventricle
    5. Fourth Ventricle
    6. Cerebral White Matter
    7. Brainstem
    8. Hippocampus
    9. CSF (see Third Ventricle)
    10. Caudate
    11. Accumbens Area
    12. Amygdala
    13. Amygdala Anterior (see Amygdala)
    14. Pallidum
    15. Putamen
    16. Thalamus Proper
    17. Ventral DC (VDC)
    18. vessel (see Putamen)
    19. Optic Chiasm
    20. Cerebellum
      1. Cerebellum Exterior (see Cerebellar Hemispheres)
      2. Cerebellar Hemispheres
      3. Cerebellar White Matter
      4. Vermal Lobules I-V
      5. Vermal Lobules VI-VII
      6. Vermal Lobules VIII-X
    21. Intracranial Cavity (ICC)
  3. Parcellation
    1. Insula
    2. Frontal Lobe
    3. Temporal Lobe
    4. Parietal Lobe
    5. Occipital Lobe
    6. White Matter for all lobes
  4. Volume Calculations

  © 2005-2007 Neuromorphometrics, Inc. All rights reserved.